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tests

Modules

test_card_file_load

Functions

all_datatypes 
all_datatypes()
Source code in tests/test_card_file_load.py 
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@pytest.fixture
def all_datatypes():
    return _load_file("all_datatypes.card")
config 
config()
Source code in tests/test_card_file_load.py 
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@pytest.fixture
def config():
    return _load_file("config.card.r7417")
dynamico 
dynamico()
Source code in tests/test_card_file_load.py 
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@pytest.fixture
def dynamico():
    return _load_file("dynamico.card.r7417")
lmdz 
lmdz()
Source code in tests/test_card_file_load.py 
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@pytest.fixture
def lmdz():
    return _load_file("lmdz.card.r7417")
orchidee 
orchidee()
Source code in tests/test_card_file_load.py 
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@pytest.fixture
def orchidee():
    return _load_file("orchidee.card.r7417")
test_card 
test_card()
Source code in tests/test_card_file_load.py 
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@pytest.fixture
def test_card():
    return _load_file("TestFile.card")
test_load_all_datatypes 
test_load_all_datatypes(all_datatypes)
Source code in tests/test_card_file_load.py 
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def test_load_all_datatypes(all_datatypes):
    assert all_datatypes == {
        "empty_section": {},
        "logical": {
            "y1": True,
            "y2": True,
            "y3": True,
            "y4": True,
            "n1": False,
            "n2": False,
            "n3": False,
            "n4": False,
        },
        "list": {
            "l1": [],
            "l2": [[], []],
            "l3": [[], [], []],
            "l4": [1],
            "l5": [[], [1]],
            "l6": [[], [1], []],
            "l7": [1, True, False, "text", '"text2"'],
            "l8": ["${SUBMIT_DIR}/PARAM/XIOS/iodef.xml", "."],
        },
        "date": {"begin": "2024-06-01", "end": "2024-06-30"},
        "path": {
            "file1": "${SUBMIT_DIR}/../${year}/some_file.ext",
            "file2": '"${SUBMIT_DIR}/../${year}/some_file.ext"',
            "file3": ".",
        },
        "empty": {"e1": None, "e2": None},
        "empty_section2": {},
        "string": {"n1": "NONE", "n2": "OFF"},
    }
test_load_config 
test_load_config(config)
Source code in tests/test_card_file_load.py 
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def test_load_config(config):
    assert config == {
        "Compatibility": {"libIGCM": 1.0},
        "UserChoices": {
            "JobName": "CREATE-AMIP.01",
            "LongName": '"create_etat0_limit for interannuel amip run"',
            "TagName": "ICOLMDZOR",
            "SpaceName": "DEVT",
            "ExperimentName": "CE0L",
            "ExpType": "ICOLMDZOR/LAM/CREATE_amip",
            "CalendarType": "leap",
            "DateBegin": "2000-06-01",
            "DateEnd": "2000-06-05",
            "PeriodLength": "5D",
            "CompressionLevel": 2,
            "EnvFile": "${SUBMIT_DIR}/../ARCH/arch.env",
            "OptMode": "prod",
        },
        "ListOfComponents": {
            "ICO": ["dynamico", "DYNAMICO"],
            "ATM": ["lmdz", "LMDZ6"],
            "IOS": ["xios", "XIOS3"],
        },
        "Executable": {
            "ICO": ["icosa_lmdz_orch22_${OptMode}.exe", "icosa_lmdz.exe", "640MPI"],
            "ATM": ['""', '""'],
            "IOS": ["xios_server_${OptMode}.exe", "xios.x", "2MPI"],
        },
        "Restarts": {
            "OverRule": False,
            "RestartDate": None,
            "RestartJobName": None,
            "RestartPath": None,
        },
        "ICO": {
            "Restart": False,
            "RestartDate": None,
            "RestartJobName": None,
            "RestartPath": None,
        },
        "ATM": {
            "Restart": False,
            "RestartDate": None,
            "RestartJobName": None,
            "RestartPath": None,
        },
        "IOS": {
            "Restart": False,
            "RestartDate": None,
            "RestartJobName": None,
            "RestartPath": None,
        },
        "Post": {
            "MetricsPCMDI": False,
            "PackFrequency": "NONE",
            "SeasonalFrequency": "NONE",
            "TimeSeriesFrequency": "NONE",
        },
    }
test_load_dynamico 
test_load_dynamico(dynamico)
Source code in tests/test_card_file_load.py 
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def test_load_dynamico(dynamico):
    assert dynamico == {
        "Compatibility": {"libIGCM": 1.0},
        "UserChoices": {
            "RESOL_NBP": 80,
            "RESOL_ATM_Z": 79,
            "etat0": "database",
            "create_etat0_limit": True,
            "iflag_phys": 1,
        },
        "InitialStateFiles": {"List": []},
        "BoundaryFiles": {"List": [], "ListNonDel": []},
        "SmoothFiles": {"List": []},
        "ParametersFiles": {
            "List": [
                ["${SUBMIT_DIR}/PARAM/DYNAMICO/earth_const.def", "."],
                [
                    "${SUBMIT_DIR}/PARAM/DYNAMICO/LAM/run_dynamico_global_France.def",
                    "run_dynamico.def",
                ],
                [
                    "${MODIPSL}/modeles/DYNAMICO/xml/DYNAMICO_XML/sponge_dynamico.xml",
                    ".",
                ],
                [
                    "${MODIPSL}/modeles/DYNAMICO/xml/DYNAMICO_XML/context_dynamico.xml",
                    ".",
                ],
                [
                    "${MODIPSL}/modeles/DYNAMICO/xml/DYNAMICO_XML/context_input_dynamico.xml",
                    ".",
                ],
                [
                    "${MODIPSL}/modeles/DYNAMICO/xml/DYNAMICO_XML/field_def_dynamico.xml",
                    ".",
                ],
                ["${MODIPSL}/modeles/ICOSA_LMDZ/xml/XML_XIOS3/param_gw.xml", "."],
                [
                    "${MODIPSL}/modeles/DYNAMICO/xml/DYNAMICO_XML/file_def_dynamico.xml",
                    ".",
                ],
            ]
        },
        "RestartFiles": {"List": ["NONE"]},
        "OutputText": {
            "List": [
                "run_dynamico.def",
                "earth_const.def",
                "iodef.xml",
                "context_dynamico.xml",
                "context_input_dynamico.xml",
                "field_def_dynamico.xml",
                "file_def_dynamico.xml",
                "out_icosa_lmdz.exe.out*",
                "out_icosa_lmdz.exe.err*",
                "xios_client_*",
            ]
        },
        "OutputFiles": {
            "List": [
                "start0.nc",
                "${R_OUT_ICO_O}/Restart/${config_UserChoices_JobName}_${year}_start.nc",
                "NONE",
            ]
        },
    }
test_load_lmdz 
test_load_lmdz(lmdz)
Source code in tests/test_card_file_load.py 
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def test_load_lmdz(lmdz):
    assert lmdz == {
        "Compatibility": {"libIGCM": 1.0},
        "UserChoices": {
            "LMDZ_Physics": "NPv6.2",
            "flag_aerosol": 0,
            "ok_ade": False,
            "ok_aie": False,
            "aerosol_couple": False,
            "read_climoz": 0,
            "ok_cdnc": False,
            "flag_aerosol_strat": 0,
        },
        "InitialStateFiles": {"List": []},
        "BoundaryFiles": {
            "List": [
                [
                    "${R_IN}/ATM/LIMIT/AMIP.v20180427/original/360x180.v2/BCS/amipbc_sst_360x180_${year}.nc",
                    "amipbc_sst_1x1.nc",
                ],
                [
                    "${R_IN}/ATM/LIMIT/AMIP.v20180427/original/360x180.v2/BCS/amipbc_sic_360x180_${year}.nc",
                    "amipbc_sic_1x1.nc",
                ],
                [
                    "${R_IN}/ATM/OZONE/UReading/historical.v20160711.v2/original/144x96x66/tro3_${year}.nc",
                    "climoz.nc",
                ],
            ],
            "ListNonDel": [
                ["${R_IN}/ATM/INPUT_CE0L/Albedo4_deg.nc", "Albedo.nc"],
                ["${R_IN}/ATM/INPUT_CE0L/ECDYN4.nc", "ECDYN.nc"],
                ["${R_IN}/ATM/INPUT_CE0L/ECDYN4.nc", "ECPHY.nc"],
                [
                    "${R_IN}/ATM/INPUT_CE0L/Relief_GMTED2010_15n015_00625deg_plus_GA.nc",
                    "Relief.nc",
                ],
                ["${R_IN}/ATM/INPUT_CE0L/landiceref_GA_HR.new.nc", "landiceref.nc"],
                ["${R_IN}/ATM/INPUT_CE0L/Rugos4_deg.nc", "Rugos.nc"],
                [
                    "${R_IN}/ATM/INPUT_CE0L/OROGRAPHY/orography_nbp${RESOL_NBP}.nc",
                    "orography.nc",
                ],
                [
                    "${R_IN}/ATM/START/LAND_WATER_FRACTION/land_water_0.25.nc",
                    "land_water.nc",
                ],
                [
                    "${MODIPSL}/modeles/LMDZ/DefLists/context_lmdz_xios3.xml",
                    "context_lmdz.xml",
                ],
                [
                    "${MODIPSL}/modeles/LMDZ/DefLists/context_input_lmdz_xios3.xml",
                    "context_input_lmdz.xml",
                ],
                ["${MODIPSL}/modeles/LMDZ/DefLists/field_def_lmdz.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/field_def_cosp1.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histmth_lmdz.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histmthCOSP_lmdz.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histmthNMC_lmdz.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histday_lmdz.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histdayCOSP_lmdz.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histdayNMC_lmdz.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histhf_lmdz.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histhfCOSP_lmdz.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histhfNMC_lmdz.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histstn_lmdz.xml", "."],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histins_lmdz.xml", "."],
                [
                    "${MODIPSL}/modeles/LMDZ/DefLists/file_def_histstrataer_lmdz.xml",
                    ".",
                ],
                [
                    "${MODIPSL}/modeles/LMDZ/DefLists/file_def_histdaystrataer_lmdz.xml",
                    ".",
                ],
                ["${MODIPSL}/modeles/LMDZ/DefLists/file_def_histLES_lmdz.xml", "."],
                [
                    "${R_IN}/ATM/AEROSOLS/CMIP6/v1/144x142/L${RESOL_ATM_Z}/aerosols1850_from_inca.nc",
                    "aerosols.nat.nc",
                ],
                [
                    "${R_IN}/ATM/AEROSOLS/CMIP6/v1/144x142/L${RESOL_ATM_Z}/aerosols1995_from_inca.nc",
                    "aerosols1980.nc",
                ],
                [
                    "${R_IN}/ATM/STRATAERO/CMIP6/v3/144x142/L${RESOL_ATM_Z}/taulwstrat.2D.ave.nc",
                    "taulwstrat.2D.nc",
                ],
                [
                    "${R_IN}/ATM/STRATAERO/CMIP6/v3/144x142/L${RESOL_ATM_Z}/tauswstrat.2D.ave.nc",
                    "tauswstrat.2D.nc",
                ],
            ],
        },
        "ParametersFiles": {
            "List": [
                ["${SUBMIT_DIR}/PARAM/LMDZ/physiq.def_${LMDZ_Physics}", "physiq.def"],
                ["${SUBMIT_DIR}/PARAM/LMDZ/vert.def_L${RESOL_ATM_Z}", "vert.def"],
                ["${SUBMIT_DIR}/PARAM/LMDZ/config.def_actuel", "config.def"],
                ["${SUBMIT_DIR}/PARAM/LMDZ/run.def", "."],
                ["${SUBMIT_DIR}/PARAM/LMDZ/tracer.def", "."],
            ]
        },
        "RestartFiles": {"List": ["NONE"]},
        "OutputText": {
            "List": [
                "physiq.def",
                "gcm.def",
                "vert.def",
                "run.def",
                "config.def",
                "tracer.def",
                "guide.def",
                "context_lmdz.xml",
                "context_input_lmdz.xml",
                "field_def_lmdz.xml",
                "file_def_*lmdz.xml",
            ]
        },
        "OutputFiles": {
            "List": [
                [
                    "limit.nc",
                    "${R_OUT_ATM_O}/Boundary/${config_UserChoices_JobName}_${year}_limit.nc",
                    "NONE",
                ],
                [
                    "climoz_LMDZ.nc",
                    "${R_OUT_ATM_O}/Boundary/${config_UserChoices_JobName}_${year}_climoz_LMDZ.nc",
                    "NONE",
                ],
                [
                    "startphy.nc",
                    "${R_OUT_ATM_O}/Restart/${config_UserChoices_JobName}_${year}_startphy.nc",
                    "NONE",
                ],
                [
                    "grid_atm.nc",
                    "${R_OUT_ATM_O}/Grid/${config_UserChoices_JobName}_${year}_grid_atm.nc",
                    "NONE",
                ],
            ]
        },
    }
test_load_orchidee 
test_load_orchidee(orchidee)
Source code in tests/test_card_file_load.py 
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def test_load_orchidee(orchidee):
    assert orchidee == {
        "Compatibility": {"libIGCM": 1.0},
        "UserChoices": {
            "AtmCo2": 369.12,
            "DefSuffix": "15pft.1ac",
            "VEGET_UPDATE_at_start": False,
            "VEGET_UPDATE": "0Y",
            "ROUTING": "interp_topo",
            "output_level_sechiba_history": 5,
            "output_level_sechiba_out_2": "NONE",
            "output_level_sechiba_history_4dim": "NONE",
            "output_level_diag_routing": 1,
            "output_level_diag_routing_r": 1,
            "output_level_forcing_by_ORCHIDEE": "NONE",
            "output_freq_sechiba_history": "1mo",
            "output_freq_sechiba_out_2": "1d",
            "output_freq_sechiba_history_4dim": "1mo",
        },
        "InitialStateFiles": {
            "List": [
                ["${R_IN}/SRF/SOIL/soil_bulk_and_ph.nc", "."],
                [
                    "${R_IN}/SRF/SOIL/soils_param_usda_with_clay_oxisol_coord.nc",
                    "soils_param.nc",
                ],
                ["${R_IN}/SRF/SOIL/soils_param_zobler_coord.nc", "soilcolor.nc"],
                ["${R_IN}/SRF/cartepente2d_15min4.nc", "cartepente2d_15min.nc"],
                ["${R_IN}/SRF/reftemp4.nc", "reftemp.nc"],
                ["${R_IN}/SRF/albedo/alb_bg_optv4c_nonsmoothedvis.nc", "alb_bg.nc"],
                [
                    "${R_IN}/SRF/PFTMAPS/CMIP6/ESA-LUH2v2/historical/15PFT.v2023.1/PFTmap_2000.nc",
                    "PFTmap.nc",
                ],
            ]
        },
        "BoundaryFiles": {
            "List": [],
            "ListNonDel": ["${R_IN}/SRF/ROUTING/routing_simple.nc", "routing.nc"],
        },
        "SmoothFiles": {"List": []},
        "ParametersFiles": {
            "List": [
                ["${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee.def_v4", "orchidee.def"],
                [
                    "${SUBMIT_DIR}/PARAM/ORCHIDEE/orchidee_pft.def_${DefSuffix}_v4",
                    "orchidee_pft.def",
                ],
                ["${MODIPSL}/modeles/ORCHIDEE_4/src_xml/file_def_orchidee.xml", "."],
                [
                    "${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_input_orchidee.xml",
                    ".",
                ],
                ["${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_orchidee.xml", "."],
                [
                    "${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_routing_interp_topo_v0_orchidee_xios3.xml",
                    "context_routing_interp_topo_v0_orchidee.xml",
                ],
                [
                    "${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_routing_interp_topo_orchidee_xios3.xml",
                    "context_routing_interp_topo_orchidee.xml",
                ],
                [
                    "${MODIPSL}/modeles/ORCHIDEE_4/src_xml/context_init_routing_interp_topo_orchidee.xml",
                    ".",
                ],
                ["${MODIPSL}/modeles/ORCHIDEE_4/src_xml/field_def_orchidee.xml", "."],
            ]
        },
        "RestartFiles": {
            "List": [
                ["sechiba_rest_out.nc", "sechiba_rest.nc", "sechiba_rest_in.nc"],
                ["routing_restart.nc", "routing_restart.nc", "routing_start.nc"],
            ]
        },
        "OutputText": {
            "List": [
                "out_orchidee*",
                "orchidee.def",
                "orchidee_pft.def",
                "used_orchidee.def",
                "used_orchidee_pft.def",
                "iodef.xml",
                "context_orchidee.xml",
                "context_input_orchidee.xml",
                "context_routing_interp_topo_v0_orchidee.xml",
                "context_routing_interp_topo_orchidee.xml",
                "context_init_routing_interp_topo_orchidee.xml",
                "field_def_orchidee.xml",
                "file_def_orchidee.xml",
                "river_desc.nc",
            ]
        },
        "OutputFiles": {
            "List": [
                [
                    "sechiba_history.nc",
                    "${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history.nc",
                    "Post_1M_sechiba_history",
                ],
                [
                    "sechiba_history_4dim.nc",
                    "${R_OUT_SRF_O_M}/${PREFIX}_1M_sechiba_history_4dim.nc",
                    "NONE",
                ],
                [
                    "sechiba_out_2.nc",
                    "${R_OUT_SRF_O_H}/${PREFIX}_HF_sechiba_out_2.nc",
                    "NONE",
                ],
                [
                    "ORCHIDEE_interp_diag.nc",
                    "${R_OUT_SRF_O_D}/${PREFIX}_ORCHIDEE_interp_diag.nc",
                    "NONE",
                ],
                [
                    "forcing_by_ORCHIDEE.nc",
                    "${R_OUT_SRF_O_H}/${PREFIX}_forcing_by_ORCHIDEE.nc",
                    "NONE",
                ],
                [
                    "diag_routing.nc",
                    "${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing.nc",
                    "NONE",
                ],
                [
                    "diag_routing_r.nc",
                    "${R_OUT_SRF_O_D}/${PREFIX}_1D_sechiba_routing_r.nc",
                    "NONE",
                ],
            ]
        },
        "Post_1M_sechiba_history": {
            "Patches": [],
            "GatherWithInternal": [
                "lon",
                "lat",
                "time_counter",
                "Areas",
                "Contfrac",
                "time_centered",
                "time_centered_bounds",
            ],
            "TimeSeriesVars2D": [
                "nobiofrac",
                "alb_nir",
                "alb_vis",
                "evap",
                "fluxlat",
                "fluxsens",
                "rain",
                "runoff",
                "snow",
                "snowf",
                "frac_snow",
                "subli",
                "tair",
                "temp_sol",
                "drainage",
                "humtot_top",
                "mrso",
                "TWBR",
                "riverflow",
                "coastalflow",
                "DelSoilMoist_daily",
                "DelIntercept_daily",
                "DelSWE_daily",
                "delstock_routing_daily",
                "LAImean",
                "transpir",
                "evapnu",
                "lwdown",
                "swdown",
                "gppCrop",
                "rhCrop",
                "Ca",
            ],
            "ChunckJob2D": "NONE",
            "TimeSeriesVars3D": [
                "lai",
                "maxvegetfrac",
                "vegetfrac",
                "nee",
                "gpp",
                "growth_resp",
                "hetero_resp",
                "humrel",
                "inter",
                "maint_resp",
                "npp",
                "precisol",
            ],
            "ChunckJob3D": "NONE",
            "Seasonal": "ON",
        },
        "Post_HF_sechiba_out_2": {
            "Patches": [],
            "GatherWithInternal": [
                "lon",
                "lat",
                "time_counter",
                "Areas",
                "Contfrac",
                "time_centered",
                "time_centered_bounds",
            ],
            "TimeSeriesVars2D": [],
            "ChunckJob2D": "NONE",
            "TimeSeriesVars3D": ["snowdz", "snowtemp", "snowrho"],
            "ChunckJob3D": "NONE",
            "Seasonal": "OFF",
        },
    }
test_load_test_card 
test_load_test_card(test_card)
Source code in tests/test_card_file_load.py 
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def test_load_test_card(test_card):
    assert test_card == {
        "Messages": {
            "Option1": '"Hello Earth"',
            "Option2": '"Hello Mars"',
            "ListVal1": [],
            "ListVal2": [],
            "ListVal3": [],
        },
        "Recipes": {"Cake": '"file1.doc"', "Starter": '"file2.doc"'},
        "ColorValues": {"Red": 120, "Blue": 230, "Green": 178, "AnotherRed": 234},
        "Couples": {
            "List1": [
                ["up", "down"],
                ["humid", "dry"],
                ["hot", "cold"],
                ["far", "close"],
            ],
            "List2": ["ice", "fire", "air", "water"],
        },
    }
test_load_xios 
test_load_xios(xios)
Source code in tests/test_card_file_load.py 
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def test_load_xios(xios):
    assert xios == {
        "Compatibility": {"libIGCM": 1.0},
        "UserChoices": {},
        "InitialStateFiles": {"List": []},
        "BoundaryFiles": {"List": [], "ListNonDel": []},
        "SmoothFiles": {"List": []},
        "ParametersFiles": {"List": ["${SUBMIT_DIR}/PARAM/XIOS/iodef.xml", "."]},
        "RestartFiles": {"List": ["NONE"]},
        "OutputText": {
            "List": ["xios_client_*", "out_xios.x.err.*", "out_xios.x.out.*"]
        },
        "OutputFiles": {"List": []},
    }
xios 
xios()
Source code in tests/test_card_file_load.py 
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@pytest.fixture
def xios():
    return _load_file("xios.card.r7417")

test_def_file

Functions

all_datatypes 
all_datatypes()
Source code in tests/test_def_file.py 
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@pytest.fixture
def all_datatypes():
    return _load_file("all_datatypes.def")
all_datatypes_dump 
all_datatypes_dump()
Source code in tests/test_def_file.py 
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@pytest.fixture
def all_datatypes_dump():
    return _open_file("all_datatypes.def.dump")
all_datatypes_with_positions 
all_datatypes_with_positions()
Source code in tests/test_def_file.py 
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@pytest.fixture
def all_datatypes_with_positions():
    return _load_file("all_datatypes.def", include_positions=True)
config_actuel 
config_actuel()
Source code in tests/test_def_file.py 
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@pytest.fixture
def config_actuel():
    return _load_file("config.def_actuel.r7417")
earth_const 
earth_const()
Source code in tests/test_def_file.py 
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@pytest.fixture
def earth_const():
    return _load_file("earth_const.def.r7417")
earth_const_dump 
earth_const_dump()
Source code in tests/test_def_file.py 
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@pytest.fixture
def earth_const_dump():
    return _open_file("earth_const.def.r7417.dump")
earth_const_with_positions 
earth_const_with_positions()
Source code in tests/test_def_file.py 
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@pytest.fixture
def earth_const_with_positions():
    return _load_file("earth_const.def.r7417", include_positions=True)
gcm_144x142_NPv63 
gcm_144x142_NPv63()
Source code in tests/test_def_file.py 
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@pytest.fixture
def gcm_144x142_NPv63():
    return _load_file("gcm.def_144x142_NPv6.3.r7417")
orchidee_v22 
orchidee_v22()
Source code in tests/test_def_file.py 
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@pytest.fixture
def orchidee_v22():
    return _load_file("orchidee.def_v22.r7417")
orchidee_v4 
orchidee_v4()
Source code in tests/test_def_file.py 
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@pytest.fixture
def orchidee_v4():
    return _load_file("orchidee.def_v4.r7445")
physiq_NPv650 
physiq_NPv650()
Source code in tests/test_def_file.py 
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@pytest.fixture
def physiq_NPv650():
    return _load_file("physiq.def_NPv6.5.0.r7417")
run_dynamico_lam_ERA5_France 
run_dynamico_lam_ERA5_France()
Source code in tests/test_def_file.py 
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@pytest.fixture
def run_dynamico_lam_ERA5_France():
    return _load_file("run_dynamico_lam_ERA5_France.def.r7417")
run_dynamico_nbp60 
run_dynamico_nbp60()
Source code in tests/test_def_file.py 
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@pytest.fixture
def run_dynamico_nbp60():
    return _load_file("run_dynamico.def_nbp60.r7417")
run_lmdz 
run_lmdz()
Source code in tests/test_def_file.py 
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@pytest.fixture
def run_lmdz():
    return _load_file("run.def.r7417")
test_all_datatypes_dumps 
test_all_datatypes_dumps(all_datatypes, all_datatypes_dump)
Source code in tests/test_def_file.py 
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def test_all_datatypes_dumps(all_datatypes, all_datatypes_dump):
    assert dumps(all_datatypes) == all_datatypes_dump
test_all_datatypes_dumps_loads 
test_all_datatypes_dumps_loads(all_datatypes)
Source code in tests/test_def_file.py 
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def test_all_datatypes_dumps_loads(all_datatypes):
    assert all_datatypes == loads(dumps(all_datatypes))
test_all_datatypes_load 
test_all_datatypes_load(all_datatypes)
Source code in tests/test_def_file.py 
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def test_all_datatypes_load(all_datatypes):
    assert all_datatypes == {
        "INCLUDEDEF": ["module1", "module2.def", '"module3.def"'],
        "array_floats": [3.3, 4.4, 1.3, 3.1],
        "array_integers": [1, 2, 3, 4],
        "array_mixed": [1, 10000000000.0, 13.31, "test1", "'test2'", '"test2"'],
        "array_strings": ["test1", "test2", "test3"],
        "auto": ("_AUTO_", None),
        "auto_default_float": ("_AUTO_", 0.25),
        "auto_default_integer": ("_AUTO_", 23),
        "auto_default_quoted_string": ("_AUTO_", '"some string"'),
        "auto_default_string": ("_AUTO_", "somestring"),
        "autoblocker": ("_AUTOBLOCKER_", None),
        "autoblocker_default": ("_AUTOBLOCKER_", 3.33),
        "float": 0.25,
        "float_negative": -0.25,
        "float_positive": 0.25,
        "float_scientific": 1476.48,
        "float_scientific_negative": -1476.48,
        "float_scientific_zero": 0.0,
        "integer": 23,
        "integer_negative": -23,
        "integer_positive": 23,
        "integer_zero": 0,
        "logical_false1": False,
        "logical_false2": False,
        "logical_false3": False,
        "logical_false4": False,
        "logical_false5": False,
        "logical_true1": True,
        "logical_true2": True,
        "logical_true3": True,
        "logical_true4": True,
        "logical_true5": True,
        "string": "somestring",
        "string_double_quotes": '"some string"',
        "string_single_quotes": "'some string'",
        "string_special": "_somestring123__",
    }
test_all_datatypes_load_with_positions 
test_all_datatypes_load_with_positions(
    all_datatypes_with_positions,
)
Source code in tests/test_def_file.py 
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def test_all_datatypes_load_with_positions(all_datatypes_with_positions):
    assert all_datatypes_with_positions == {
        "logical_true1": {"value": True, "start_pos": 152, "end_pos": 153},
        "logical_true2": {"value": True, "start_pos": 168, "end_pos": 169},
        "logical_true3": {"value": True, "start_pos": 184, "end_pos": 188},
        "logical_true4": {"value": True, "start_pos": 203, "end_pos": 207},
        "logical_true5": {"value": True, "start_pos": 222, "end_pos": 226},
        "logical_false1": {"value": False, "start_pos": 243, "end_pos": 244},
        "logical_false2": {"value": False, "start_pos": 260, "end_pos": 261},
        "logical_false3": {"value": False, "start_pos": 277, "end_pos": 282},
        "logical_false4": {"value": False, "start_pos": 298, "end_pos": 303},
        "logical_false5": {"value": False, "start_pos": 319, "end_pos": 324},
        "integer": {"value": 23, "start_pos": 334, "end_pos": 336},
        "integer_negative": {"value": -23, "start_pos": 354, "end_pos": 357},
        "integer_positive": {"value": 23, "start_pos": 375, "end_pos": 378},
        "integer_zero": {"value": 0, "start_pos": 392, "end_pos": 393},
        "float": {"value": 0.25, "start_pos": 401, "end_pos": 405},
        "float_negative": {"value": -0.25, "start_pos": 421, "end_pos": 426},
        "float_positive": {"value": 0.25, "start_pos": 442, "end_pos": 447},
        "float_scientific": {"value": 1476.48, "start_pos": 466, "end_pos": 477},
        "float_scientific_negative": {
            "value": -1476.48,
            "start_pos": 504,
            "end_pos": 516,
        },
        "float_scientific_zero": {"value": 0.0, "start_pos": 539, "end_pos": 546},
        "string": {"value": "somestring", "start_pos": 555, "end_pos": 565},
        "string_special": {
            "value": "_somestring123__",
            "start_pos": 581,
            "end_pos": 597,
        },
        "string_single_quotes": {
            "value": "'some string'",
            "start_pos": 661,
            "end_pos": 674,
        },
        "string_double_quotes": {
            "value": '"some string"',
            "start_pos": 696,
            "end_pos": 709,
        },
        "array_integers": {"value": [1, 2, 3, 4], "start_pos": 728, "end_pos": 738},
        "array_floats": {
            "value": [3.3, 4.4, 1.3, 3.1],
            "start_pos": 754,
            "end_pos": 772,
        },
        "array_strings": {
            "value": ["test1", "test2", "test3"],
            "start_pos": 789,
            "end_pos": 808,
        },
        "array_mixed": {
            "value": [1, 10000000000.0, 13.31, "test1", "'test2'", '"test2"'],
            "start_pos": 823,
            "end_pos": 862,
        },
        "auto": {"value": ("_AUTO_", None), "start_pos": 869, "end_pos": 875},
        "auto_default_integer": {
            "value": ("_AUTO_", 23),
            "start_pos": 897,
            "end_pos": 916,
        },
        "auto_default_float": {
            "value": ("_AUTO_", 0.25),
            "start_pos": 936,
            "end_pos": 957,
        },
        "auto_default_string": {
            "value": ("_AUTO_", "somestring"),
            "start_pos": 978,
            "end_pos": 1005,
        },
        "auto_default_quoted_string": {
            "value": ("_AUTO_", '"some string"'),
            "start_pos": 1033,
            "end_pos": 1063,
        },
        "autoblocker": {
            "value": ("_AUTOBLOCKER_", None),
            "start_pos": 1077,
            "end_pos": 1090,
        },
        "autoblocker_default": {
            "value": ("_AUTOBLOCKER_", 3.33),
            "start_pos": 1111,
            "end_pos": 1137,
        },
        "INCLUDEDEF": [
            {"value": "module1", "start_pos": 11, "end_pos": 18},
            {"value": "module2.def", "start_pos": 30, "end_pos": 41},
            {"value": '"module3.def"', "start_pos": 53, "end_pos": 66},
        ],
    }
test_dynamico_earth_const_dumps 
test_dynamico_earth_const_dumps(
    earth_const, earth_const_dump
)
Source code in tests/test_def_file.py 
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def test_dynamico_earth_const_dumps(earth_const, earth_const_dump):
    assert dumps(earth_const) == earth_const_dump
test_dynamico_earth_const_dumps_loads 
test_dynamico_earth_const_dumps_loads(earth_const)
Source code in tests/test_def_file.py 
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def test_dynamico_earth_const_dumps_loads(earth_const):
    assert earth_const == loads(dumps(earth_const))
test_dynamico_earth_const_load 
test_dynamico_earth_const_load(earth_const)
Source code in tests/test_def_file.py 
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def test_dynamico_earth_const_load(earth_const):
    assert earth_const == {
        "radius": 6.371229e6,
        "g": 9.80665,
        "omega": 7.292e-05,
        "kappa": 0.2857143,
        "cpp": 1004.70885783307,
        "preff": 101325.0,
        "scale_factor": 1.0,
        "netcdf_prec": "double",
    }
test_dynamico_earth_const_load_with_positions 
test_dynamico_earth_const_load_with_positions(
    earth_const_with_positions,
)
Source code in tests/test_def_file.py 
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def test_dynamico_earth_const_load_with_positions(earth_const_with_positions):
    assert earth_const_with_positions == {
        "radius": {"value": 6371229.0, "start_pos": 50, "end_pos": 60},
        "g": {"value": 9.80665, "start_pos": 99, "end_pos": 106},
        "omega": {"value": 7.292e-05, "start_pos": 158, "end_pos": 166},
        "kappa": {"value": 0.2857143, "start_pos": 209, "end_pos": 218},
        "cpp": {"value": 1004.70885783307, "start_pos": 324, "end_pos": 340},
        "preff": {"value": 101325.0, "start_pos": 394, "end_pos": 401},
        "scale_factor": {"value": 1.0, "start_pos": 479, "end_pos": 481},
        "netcdf_prec": {"value": "double", "start_pos": 526, "end_pos": 532},
    }
test_lmdz_config_actuel_dumps_loads 
test_lmdz_config_actuel_dumps_loads(config_actuel)
Source code in tests/test_def_file.py 
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def test_lmdz_config_actuel_dumps_loads(config_actuel):
    assert config_actuel == loads(dumps(config_actuel))
test_lmdz_config_actuel_load 
test_lmdz_config_actuel_load(config_actuel)
Source code in tests/test_def_file.py 
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def test_lmdz_config_actuel_load(config_actuel):
    assert config_actuel == {
        "level_coupling_esm": ("_AUTO_", 0),
        "carbon_cycle_cpl": ("_AUTO_", False),
        "carbon_cycle_tr": ("_AUTO_", False),
        "carbon_cycle_rad": ("_AUTO_", False),
        "read_fco2_ocean_cor": ("_AUTO_", False),
        "var_fco2_ocean_cor": ("_AUTO_", 0.2576),
        "read_fco2_land_cor": ("_AUTO_", False),
        "var_fco2_land_cor": ("_AUTO_", -0.2036),
        "iflag_cycle_diurne": 1,
        "soil_model": True,
        "t_coupl": ("_AUTO_", None),
        "nbapp_rad": 16,
        "pmagic": ("_AUTO_", 0.0),
        "R_ecc": ("_AUTO_", 0.016715),
        "R_peri": ("_AUTO_", 102.7),
        "R_incl": ("_AUTO_", 23.441),
        "solaire": ("_AUTO_", 1361.20),
        "ok_suntime_rrtm": True,
        "co2_ppm": ("_AUTO_", 3.6912e02),
        "co2_ppm0": ("_AUTO_", 2.8432e02),
        "co2_ppm_per": ("_AUTO_", 14.7648e02),
        "CH4_ppb": ("_AUTO_", 1.7780e03),
        "N2O_ppb": ("_AUTO_", 3.1576e02),
        "CFC11_ppt": ("_AUTO_", 6.3990e01),
        "CFC12_ppt": ("_AUTO_", 1.0511e03),
        "ok_ade": ("_AUTO_", None),
        "ok_aie": ("_AUTO_", None),
        "aer_type": "actuel",
        "aerosol_couple": ("_AUTO_", None),
        "chemistry_couple": ("_AUTO_", None),
        "flag_aerosol": ("_AUTO_", None),
        "ok_cdnc": ("_AUTO_", None),
        "ok_alw": True,
        "read_climoz": ("_AUTO_", None),
        "flag_aerosol_strat": ("_AUTO_", 2),
        "ok_volcan": False,
        "ok_cosp": ("_AUTO_", None),
    }
test_lmdz_gcm_144x142_NPv63_dumps_loads 
test_lmdz_gcm_144x142_NPv63_dumps_loads(gcm_144x142_NPv63)
Source code in tests/test_def_file.py 
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def test_lmdz_gcm_144x142_NPv63_dumps_loads(gcm_144x142_NPv63):
    assert gcm_144x142_NPv63 == loads(dumps(gcm_144x142_NPv63))
test_lmdz_gcm_144x142_NPv63_load 
test_lmdz_gcm_144x142_NPv63_load(gcm_144x142_NPv63)
Source code in tests/test_def_file.py 
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def test_lmdz_gcm_144x142_NPv63_load(gcm_144x142_NPv63):
    assert gcm_144x142_NPv63 == {
        "day_step": 672,
        "iperiod": 7,
        "lstardis": True,
        "nitergdiv": 1,
        "nitergrot": 2,
        "niterh": 2,
        "tetagdiv": 3600.0,
        "tetagrot": 21600.0,
        "tetatemp": 10800.0,
        "coefdis": 0.0,
        "purmats": False,
        "iflag_phys": 1,
        "read_start": True,
        "iphysiq": 7,
        "clon": 0.0,
        "clat": 0.0,
        "grossismx": 1.0,
        "grossismy": 1.0,
        "fxyhypb": True,
        "dzoomx": 0.0,
        "dzoomy": 0.0,
        "taux": 3.0,
        "tauy": 3.0,
        "ysinus": True,
        "ngroup": 4,
    }
test_lmdz_physiq_NPv650_dumps_loads 
test_lmdz_physiq_NPv650_dumps_loads(physiq_NPv650)
Source code in tests/test_def_file.py 
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def test_lmdz_physiq_NPv650_dumps_loads(physiq_NPv650):
    assert physiq_NPv650 == loads(dumps(physiq_NPv650))
test_lmdz_physiq_NPv650_load 
test_lmdz_physiq_NPv650_load(physiq_NPv650)
Source code in tests/test_def_file.py 
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def test_lmdz_physiq_NPv650_load(physiq_NPv650):
    assert physiq_NPv650 == {
        "ok_limitvrai": False,
        "f_cdrag_stable": 1,
        "f_cdrag_ter": 1,
        "min_wind_speed": 0.1,
        "ifl_pbltree": 1,
        "Cd_frein": 0.016,
        "f_cdrag_oce": 1,
        "iflag_z0_oce": 1,
        "f_z0qh_oce": 1.55,
        "iflag_gusts": 2,
        "f_gust_bl": 0.845,
        "f_gust_wk": 0.2,
        "f_qsat_oce": 0.98,
        "cdmmax": 0.2,
        "cdhmax": 0.2,
        "new_yamada4": True,
        "yamada4_num": 5,
        "iflag_corr_sta": 4,
        "f_ri_cd_min": 0.01,
        "yamada4_ric": 0.18,
        "lmixmin": 0,
        "iflag_pbl": 12,
        "ksta_ter": 1e-07,
        "ksta": 1e-10,
        "ok_kzmin": False,
        "addtkeoro": 2,
        "alphatkeoro": 1,
        "smallscales_tkeoro": True,
        "nm_oro_t": 0,
        "zstd_orodr_t": 0,
        "zpmm_orodr_t": 0,
        "zpmm_orolf_t": 0,
        "ok_orodr": True,
        "ok_orolf": True,
        "f_rugoro": 0,
        "sso_gfrcri": 0.7,
        "sso_gkdrag": 0.6,
        "sso_gkwake": 0.4,
        "sso_gklift": 0.1,
        "ok_gwd_rando": True,
        "gwd_rando_ruwmax": 0.5,
        "gwd_rando_sat": 0.6,
        "gwd_front_ruwmax": 3,
        "iflag_rrtm": 1,
        "NSW": 6,
        "alb_vis_sno_lic": 0.96,
        "alb_nir_sno_lic": 0.68,
        "inertie_sno": 350,
        "iflag_sic": 1,
        "inertie_lic": 2000,
        "inertie_sic": 2000,
        "tau_gl": ("_AUTO_", 5.0),
        "iflag_albedo": 1,
        "nbapp_cv": 48,
        "ok_bad_ecmwf_thermo": False,
        "cld_lc_lsc": 0.001,
        "cld_lc_con": 0.001,
        "cld_tau_lsc": 900,
        "cld_tau_con": 900,
        "ffallv_lsc": 0.8,
        "ffallv_con": 0.8,
        "coef_eva": 0.0001,
        "iflag_evap_prec": 2,
        "t_glace_min": 243.15,
        "t_glace_max": 273.15,
        "exposant_glace": 0.5,
        "iflag_t_glace": 3,
        "iflag_ice_thermo": 1,
        "reevap_ice": False,
        "iflag_bergeron": 2,
        "iflag_fisrtilp_qsat": 4,
        "iflag_cld_th": 6,
        "fact_cldcon": 1,
        "facttemps": 0,
        "iflag_pdf": 1,
        "ok_newmicro": True,
        "iflag_ratqs": 4,
        "ratqsp0": 45000,
        "ratqsdp": 10000,
        "ratqsbas": 0.002,
        "ratqshaut": 0.4,
        "rad_froid": 35,
        "rad_chau1": 12,
        "rad_chau2": 11,
        "bl95_b0": 1.3,
        "bl95_b1": 0.2,
        "new_oliq": True,
        "oliqmax": 0.0015,
        "oicemax": 0.0015,
        "rei_min": 16,
        "rei_max": 61.29,
        "iflag_cloudth_vert": 3,
        "cloudth_vert_alpha": 0.5,
        "cloudth_vert_alpha_th": 0.5,
        "cdnc_min": 10,
        "iflag_con": 3,
        "if_ebil": 0,
        "epmax": 0.999,
        "ok_adj_ema": False,
        "iflag_clw": 0,
        "iflag_clos": 2,
        "iflag_mix": 1,
        "qqa1": 1,
        "qqa2": 0,
        "cvl_corr": 1,
        "Fmax": 0.65,
        "dpbase": -40,
        "sigdz": 0.003,
        "spfac": 0.15,
        "tau": 8000,
        "tau": 8000,
        "flag_wb": 50,
        "wbmax": 2.8,
        "ok_convstop": False,
        "tau_stop": 15000,
        "ok_intermittent": False,
        "iflag_mix_adiab": 0,
        "coef_peel": 0.25,
        "flag_epKEorig": 1,
        "elcrit": 0.0003,
        "tlcrit": -55,
        "pbcrit": 150,
        "ptcrit": 500,
        "flag_wk_check_trgl": False,
        "iflag_wk_check_trgl": 2,
        "iflag_alp_wk_cond": 1,
        "cv_flag_feed": 2,
        "ok_optim_yield": True,
        "iflag_cld_cv": 0,
        "ok_bug_cv_trac": ("_AUTO_", False),
        "ok_bug_ajs_cv": False,
        "keepbug_ice_frac": False,
        "iflag_pbl_split": 10,
        "alp_bl_k": 0.5,
        "alp_offset": 0,
        "t_top_max": 1000,
        "iflag_trig_bl": 1,
        "s_trig": 12000000,
        "tau_trig_shallow": 1200,
        "tau_trig_deep": 1200,
        "random_notrig_max": 0.99,
        "tmax_fonte_cv": 278.15,
        "iflag_clos_bl": 1,
        "stark": 0.33,
        "alpk": 0.25,
        "iflag_thermals": 18,
        "nsplit_thermals": 1,
        "tau_thermals": 0,
        "iflag_thermals_ed": 8,
        "thermals_afact": 0.666667,
        "thermals_fact_epsilon": 0.002,
        "thermals_betalpha": 0.9,
        "thermals_detr_q_coef": 0.012,
        "cloudth_sigma1s_factor": 1.1,
        "cloudth_sigma2s_factor": 0.09,
        "fact_thermals_ed_dz": 0.07,
        "iflag_thermals_optflux": 0,
        "iflag_coupl": 5,
        "seuil_inversion": -0.08,
        "iflag_thermals_closure": 2,
        "iflag_wake": 1,
        "coefgw": 4,
        "wdens_ref_o": 1e-09,
        "wdens_ref_l": 8e-12,
        "ok_adjwk": True,
        "ok_bug_gfl": False,
        "iflag_wk_profile": 1,
        "wk_pupper": 3.5,
        "wk_frac_int_delta_t": 0.75,
        "wk_delta_t_min": 0,
        "iflag_wk_new_ptop": 2,
        "ok_bug_zg_wk_pbl": False,
        "ok_bug_split_th": False,
        "iflag_ener_conserv": 10,
        "ok_conserv_q": True,
        "fl_cor_ebil": 1,
        "ok_lic_cond": True,
        "adjust_tropopause": True,
    }
test_lmdz_vert_L95_dumps_loads 
test_lmdz_vert_L95_dumps_loads(vert_L95)
Source code in tests/test_def_file.py 
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def test_lmdz_vert_L95_dumps_loads(vert_L95):
    assert vert_L95 == loads(dumps(vert_L95))
test_lmdz_vert_L95_load 
test_lmdz_vert_L95_load(vert_L95)
Source code in tests/test_def_file.py 
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def test_lmdz_vert_L95_load(vert_L95):
    assert vert_L95 == {
        "vert_sampling": "strato_custom",
        "iflag_top_bound": 2,
        "tau_top_bound": 0.0005,
        "mode_top_bound": 3,
        "llm": 95,
        "disvert": "strato_custom",
        "iflag_sponge": 2,
        "tau_sponge": 5e-4,
        "mode_sponge": 1,
        "vert_scale": 7.0,
        "vert_dzmin": 0.017,
        "vert_dzlow": 0.009,
        "vert_z0low": 2.0,
        "vert_dzmid": 1.1,
        "vert_z0mid": 6,
        "vert_h_mid": 17,
        "vert_dzhig": 10,
        "vert_z0hig": 75.0,
        "vert_h_hig": 20.0,
        "vert_prof_dissip": 1,
        "dissip_zref": 50,
        "ok_strato": True,
        "ok_hines": False,
    }
test_orchidee_v22_dumps_loads 
test_orchidee_v22_dumps_loads(orchidee_v22)
Source code in tests/test_def_file.py 
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def test_orchidee_v22_dumps_loads(orchidee_v22):
    assert orchidee_v22 == loads(dumps(orchidee_v22))
test_orchidee_v22_load 
test_orchidee_v22_load(orchidee_v22)
Source code in tests/test_def_file.py 
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def test_orchidee_v22_load(orchidee_v22):
    assert orchidee_v22 == {
        "ALB_BG_FILE": "alb_bg.nc",
        "ALB_BG_MODIS": True,
        "ALB_LEAF_NIR": [
            0.0,
            0.23,
            0.18,
            0.18,
            0.2,
            0.24,
            0.15,
            0.26,
            0.2,
            0.24,
            0.27,
            0.28,
            0.26,
            0.24,
            0.24,
        ],
        "ALB_LEAF_VIS": [
            0.0,
            0.04,
            0.04,
            0.04,
            0.04,
            0.03,
            0.03,
            0.03,
            0.03,
            0.06,
            0.06,
            0.06,
            0.06,
            0.06,
            0.06,
        ],
        "ALWAYS_INIT": [
            True,
            True,
            True,
            True,
            True,
            True,
            True,
            True,
            True,
            True,
            False,
            True,
            True,
            False,
            True,
        ],
        "ATM_CO2": ("_AUTO_", 284.32),
        "CARBON_TAU_IPASSIVE": 300,
        "CARBON_TAU_ISLOW": 7,
        "CDRAG_from_GCM": True,
        "CHEMISTRY_BVOC": ("_AUTO_", False),
        "CO2_FOR_BVOC_POSSELL": False,
        "CO2_FOR_BVOC_WILKINSON": False,
        "CWRR_AKS_A0": 0.0,
        "CWRR_AKS_POWER": 0.0,
        "CWRR_NKS_A0": 0.0,
        "CWRR_NKS_POWER": 0.0,
        "DEPTH_MAX_T": 90,
        "DOWNREGULATION_CO2_BASELEVEL": 380.0,
        "DOWNREGULATION_CO2_NEW": True,
        "DO_RSOIL": False,
        "DO_WOOD_HARVEST": ("_AUTO_", True),
        "FIRE_DISABLE": True,
        "FORCE_CO2_VEG": ("_AUTO_", False),
        "FRAC_GROWTHRESP__02": 0.35,
        "FRAC_GROWTHRESP__03": 0.35,
        "FRAC_GROWTHRESP__04": 0.28,
        "FRAC_GROWTHRESP__05": 0.28,
        "FRAC_GROWTHRESP__06": 0.28,
        "FRAC_GROWTHRESP__07": 0.35,
        "FRAC_GROWTHRESP__08": 0.35,
        "FRAC_GROWTHRESP__09": 0.35,
        "FRAC_GROWTHRESP__10": 0.28,
        "FRAC_GROWTHRESP__11": 0.28,
        "FRAC_GROWTHRESP__12": 0.28,
        "FRAC_GROWTHRESP__13": 0.28,
        "FRAC_GROWTHRESP__14": 0.35,
        "FRAC_GROWTHRESP__15": 0.35,
        "HYDROL_CWRR": True,
        "LAI_MAP": ("_AUTO_", False),
        "LAI_MAX__02": 7.0,
        "LAI_MAX__03": 5.0,
        "LAI_MAX__04": 5.0,
        "LAI_MAX__05": 4.0,
        "LAI_MAX__06": 5.0,
        "LAI_MAX__07": 3.5,
        "LAI_MAX__08": 4.0,
        "LAI_MAX__09": 3.0,
        "LAI_MAX__10": 2.5,
        "LAI_MAX__11": 2.0,
        "LAI_MAX__12": 5.0,
        "LAI_MAX__13": 5.0,
        "LAI_MAX__14": 2.5,
        "LAI_MAX__15": 2.0,
        "MAINT_RESP_SLOPE_C__02": 0.12,
        "MAINT_RESP_SLOPE_C__03": 0.12,
        "MAINT_RESP_SLOPE_C__04": 0.16,
        "MAINT_RESP_SLOPE_C__05": 0.16,
        "MAINT_RESP_SLOPE_C__06": 0.16,
        "MAINT_RESP_SLOPE_C__07": 0.25,
        "MAINT_RESP_SLOPE_C__08": 0.25,
        "MAINT_RESP_SLOPE_C__09": 0.25,
        "MAINT_RESP_SLOPE_C__10": 0.16,
        "MAINT_RESP_SLOPE_C__11": 0.12,
        "MAINT_RESP_SLOPE_C__12": 0.16,
        "MAINT_RESP_SLOPE_C__13": 0.12,
        "MAINT_RESP_SLOPE_C__14": 0.12,
        "MAINT_RESP_SLOPE_C__15": 0.25,
        "NVM": 15,
        "OK_EXPLICITSNOW": True,
        "OK_FREEZE": True,
        "PFT_NAME__10": "'temperate C3           grass      '",
        "PFT_NAME__14": "'tropical  C3           grass      '",
        "PFT_NAME__15": "'boreal    C3           grass      '",
        "PFT_TO_MTC": [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 10, 10],
        "PRINTLEV": 1,
        "READ_REFTEMP": True,
        "RIVER_DESC": ("_AUTO_", None),
        "RIVER_ROUTING": ("_AUTO_", None),
        "ROUGH_DYN": True,
        "ROUTING_METHOD": ("_AUTO_", None),
        "SECHIBA_QSINT": 0.02,
        "SECHIBA_reset_time": True,
        "SECHIBA_restart_in": ("_AUTOBLOCKER_", None),
        "SNOWA_AGED_NIR": [
            0.5,
            0,
            0,
            0.1,
            0.37,
            0.08,
            0.16,
            0.17,
            0.27,
            0.44,
            0.44,
            0.44,
            0.44,
            0.44,
            0.44,
        ],
        "SNOWA_AGED_VIS": [
            0.74,
            0,
            0,
            0.08,
            0.24,
            0.07,
            0.18,
            0.18,
            0.33,
            0.57,
            0.57,
            0.57,
            0.57,
            0.57,
            0.57,
        ],
        "SNOWA_DEC_NIR": [
            0.13,
            0,
            0,
            0.1,
            0.1,
            0.16,
            0.04,
            0.07,
            0.08,
            0.12,
            0.12,
            0.12,
            0.12,
            0.12,
            0.12,
        ],
        "SNOWA_DEC_VIS": [
            0.21,
            0,
            0,
            0.14,
            0.08,
            0.17,
            0.05,
            0.06,
            0.09,
            0.15,
            0.15,
            0.15,
            0.15,
            0.15,
            0.15,
        ],
        "SOILALB_FILE": "soilcolor.nc",
        "SOILCLASS_FILE": "soils_param.nc",
        "SOILTYPE_CLASSIF": "zobler",
        "STOMATE_OK_CO2": True,
        "STOMATE_OK_STOMATE": ("_AUTOBLOCKER_", None),
        "STOMATE_RESTART_FILEIN": ("_AUTOBLOCKER_", None),
        "STRESS_GM": [
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
        ],
        "STRESS_GS": [
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
        ],
        "STRESS_VCMAX": [
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
            1.0,
        ],
        "TCST_SNOWA": 10.0,
        "VCMAX25__02": 45.0,
        "VCMAX25__03": 45.0,
        "VCMAX25__04": 35.0,
        "VCMAX25__05": 40.0,
        "VCMAX25__06": 50.0,
        "VCMAX25__07": 45.0,
        "VCMAX25__08": 35.0,
        "VCMAX25__09": 35.0,
        "VCMAX25__10": 50.0,
        "VCMAX25__11": 50.0,
        "VCMAX25__12": 60.0,
        "VCMAX25__13": 60.0,
        "VCMAX25__14": 50.0,
        "VCMAX25__15": 40.0,
        "VEGET_UPDATE": ("_AUTO_", None),
        "WETNESS_TRANSPIR_MAX": [
            0.8,
            0.8,
            0.8,
            0.8,
            0.8,
            0.8,
            0.8,
            0.8,
            0.8,
            0.8,
            0.8,
            0.8,
            0.8,
        ],
        "WRITE_STEP": 0,
        "XIOS_ORCHIDEE_OK": True,
    }
test_orchidee_v4_dumps_loads 
test_orchidee_v4_dumps_loads(orchidee_v4)
Source code in tests/test_def_file.py 
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def test_orchidee_v4_dumps_loads(orchidee_v4):
    assert orchidee_v4 == loads(dumps(orchidee_v4))
test_orchidee_v4_load 
test_orchidee_v4_load(orchidee_v4)
Source code in tests/test_def_file.py 
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def test_orchidee_v4_load(orchidee_v4):
    assert orchidee_v4 == {
        "ALB_BG_FILE": "alb_bg.nc",
        "ALB_BG_MODIS": True,
        "ATM_CO2": ("_AUTO_", 284.32),
        "CHEMISTRY_BVOC": ("_AUTO_", False),
        "CNLEAF_VAR": "CN_LEAF",
        "CO2_FOR_BVOC_POSSELL": False,
        "CO2_FOR_BVOC_WILKINSON": False,
        "ENERGY_CONTROL": 2,
        "ERR_ACT": 1,
        "FORCE_CO2_VEG": ("_AUTO_", False),
        "FR_CENTER_C": -1.0,
        "HACK_KB_M1": True,
        "HACK_PWC_H": True,
        "IMPOSE_VEG": False,
        "NCIRC": 3,
        "NINPUT_UPDATE": ("_AUTO_", None),
        "NSNOW": 12,
        "Nammonium_FILE": "Nammonium.nc",
        "Nammonium_VAR": "nhx",
        "Nbnf_FILE": "bnf.nc",
        "Nbnf_VAR": "BNF_MGN_PERM2_PERYR",
        "Nfert_ammo_cropland_FILE": "Nfert_ammo_cropland.nc",
        "Nfert_ammo_cropland_VAR": "nfer_crop_nh4",
        "Nfert_ammo_pasture_FILE": "Nfert_ammo_pasture.nc",
        "Nfert_ammo_pasture_VAR": "nfer_pas_nh4",
        "Nfert_nitr_cropland_FILE": "Nfert_nitr_cropland.nc",
        "Nfert_nitr_cropland_VAR": "nfer_crop_no3",
        "Nfert_nitr_pasture_FILE": "Nfert_nitr_pasture.nc",
        "Nfert_nitr_pasture_VAR": "nfer_pas_no3",
        "Nnitrate_FILE": "Nnitrate.nc",
        "Nnitrate_VAR": "noy",
        "OK_EXPLICITSNOW": True,
        "OK_FREEZE": True,
        "OK_READ_FM_MAP": True,
        "PRINTLEV": 1,
        "RATIO_Z0M_Z0H": 10.0,
        "RIVER_DESC": ("_AUTO_", None),
        "RIVER_ROUTING": ("_AUTO_", None),
        "ROUGH_DYN": True,
        "ROUTING_METHOD": ("_AUTO_", None),
        "RSOIL_SCALE": 1.0,
        "SECHIBA_restart_in": ("_AUTOBLOCKER_", None),
        "SOILALB_FILE": "soilcolor.nc",
        "SOILTYPE_CLASSIF": "usda",
        "SPINUP_ANALYTIC": False,
        "SPINUP_PERIOD": 10,
        "STOMATE_IMPOSE_CN": ("_AUTO_", None),
        "STOMATE_OK_STOMATE": ("_AUTOBLOCKER_", None),
        "STOMATE_READ_CN": False,
        "STOMATE_RESTART_FILEIN": ("_AUTOBLOCKER_", None),
        "TCST_SNOWA": 15.0,
        "TEST_ALB_RT_BGSNOWBARE": True,
        "TEST_GRID": 1,
        "TEST_PFT": 2,
        "USE_RATIO_Z0M_Z0H": True,
        "USE_SOILC_INSULATION": True,
        "VEGETMAP_RESET": ("_AUTO_", None),
        "VEGET_UPDATE": ("_AUTO_", None),
        "XIOS_ORCHIDEE_OK": True,
    }
test_run_dynamico_lam_ERA5_France_dumps_loads 
test_run_dynamico_lam_ERA5_France_dumps_loads(
    run_dynamico_lam_ERA5_France,
)
Source code in tests/test_def_file.py 
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def test_run_dynamico_lam_ERA5_France_dumps_loads(run_dynamico_lam_ERA5_France):
    assert run_dynamico_lam_ERA5_France == loads(dumps(run_dynamico_lam_ERA5_France))
test_run_dynamico_lam_ERA5_France_load 
test_run_dynamico_lam_ERA5_France_load(
    run_dynamico_lam_ERA5_France,
)
Source code in tests/test_def_file.py 
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def test_run_dynamico_lam_ERA5_France_load(run_dynamico_lam_ERA5_France):
    assert run_dynamico_lam_ERA5_France == {
        "mpi_threading_mode": "funneled",
        "metric_type": "icosa_area",
        "area_center_lon": 3,
        "area_center_lat": 47,
        "area_radius": 800,
        "PS_relax_out": 3600,
        "T_relax_out": 3600,
        "U_relax_out": 3600,
        "Q_relax_out": 3600,
        "nudging_vertical_levels": "pressure",
        "guided_type": ("_AUTO_", None),
        "itau_nudging": 120,
        "nudging_zone": "area",
        "nudging_stiffness": 8,
        "nbp": 40,
        "nsplit_i": 4,
        "nsplit_j": 4,
        "omp_level_size": ("_AUTOBLOCKER_", None),
        "read_metric": False,
        "optim_it": 0,
        "dt": 30.0,
        "itau_adv": 1,
        "run_length": ("_AUTOBLOCKER_", None),
        "etat0_start_iteration_reset": ("_AUTOBLOCKER_", None),
        "write_period": 10800,
        "itau_check_conserv": 100,
        "nqtot": ("_AUTO_", 4),
        "out_pression_level": 85000,
        "start_file_name": "start",
        "restart_file_name": "restart",
        "using_oasis": ("_AUTOBLOCKER_", None),
        "tau_graddiv": 3600,
        "nitergdiv": 1,
        "tau_gradrot": 21600,
        "nitergrot": 2,
        "tau_divgrad": 10800,
        "niterdivgrad": 2,
        "physics": "phys_external",
        "itau_physics": 30,
        "create_etat0_limit": ("_AUTO_", None),
        "etat0": ("_AUTO_", None),
        "etat0_database_type": "ERA5_forcing",
        "iflag_phys": ("_AUTO_", None),
        "param_gw_method": "legacy",
        "heldsz_p0": 101080,
    }
test_run_dynamico_nbp60_dumps_loads 
test_run_dynamico_nbp60_dumps_loads(run_dynamico_nbp60)
Source code in tests/test_def_file.py 
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def test_run_dynamico_nbp60_dumps_loads(run_dynamico_nbp60):
    assert run_dynamico_nbp60 == loads(dumps(run_dynamico_nbp60))
test_run_dynamico_nbp60_load 
test_run_dynamico_nbp60_load(run_dynamico_nbp60)
Source code in tests/test_def_file.py 
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def test_run_dynamico_nbp60_load(run_dynamico_nbp60):
    assert run_dynamico_nbp60 == {
        "metric_type": "icosa_global",
        "guided_type": ("_AUTO_", None),
        "itau_nudging": 48,
        "nudging_zone": "global",
        "U_relax_in": 21600,
        "PS_relax_in": 1e30,
        "T_relax_in": 1e30,
        "Q_relax_in": 1e30,
        "guide_U": True,
        "mpi_threading_mode": "funneled",
        "nbp": 60,
        "nsplit_i": 6,
        "nsplit_j": 6,
        "omp_level_size": ("_AUTOBLOCKER_", None),
        "read_metric": ("_AUTO_", None),
        "optim_it": ("_AUTO_", None),
        "dt": 150.0,
        "itau_adv": 1,
        "run_length": ("_AUTOBLOCKER_", None),
        "etat0_start_iteration_reset": ("_AUTOBLOCKER_", None),
        "write_period": 86400,
        "itau_check_conserv": 100,
        "nqtot": ("_AUTO_", 4),
        "out_pression_level": 85000,
        "start_file_name": "start",
        "restart_file_name": "restart",
        "using_oasis": ("_AUTOBLOCKER_", None),
        "tau_graddiv": 2400,
        "nitergdiv": 1,
        "tau_gradrot": 14400,
        "nitergrot": 2,
        "tau_divgrad": 7200,
        "niterdivgrad": 2,
        "physics": "phys_external",
        "itau_physics": 6,
        "create_etat0_limit": ("_AUTO_", None),
        "etat0": ("_AUTO_", None),
        "iflag_phys": ("_AUTO_", None),
        "param_gw_method": "legacy",
        "heldsz_p0": 101080,
    }
test_run_lmdz_dumps_loads 
test_run_lmdz_dumps_loads(run_lmdz)
Source code in tests/test_def_file.py 
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def test_run_lmdz_dumps_loads(run_lmdz):
    assert run_lmdz == loads(dumps(run_lmdz))
test_run_lmdz_load 
test_run_lmdz_load(run_lmdz)
Source code in tests/test_def_file.py 
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def test_run_lmdz_load(run_lmdz):
    assert run_lmdz == {
        "INCLUDEDEF": [
            "run_dynamico.def",
            "earth_const.def",
            "physiq.def",
            "gcm.def",
            "vert.def",
            "orchidee.def",
            "orchidee_pft.def",
            "config.def",
            "reprobus.def",
            "guide.def",
            "inca.def",
        ],
        "VEGET": ("_AUTOBLOCKER_", None),
        "adjust": False,
        "anneeref": ("_AUTOBLOCKER_", None),
        "calend": ("_AUTOBLOCKER_", None),
        "config_inca": ("_AUTOBLOCKER_", None),
        "cpl_current": True,
        "cpl_old_calving": ("_AUTO_", None),
        "dayref": ("_AUTOBLOCKER_", None),
        "iconser": 240,
        "iecri": 1,
        "iflag_phytrac": ("_AUTOBLOCKER_", 0),
        "nday": ("_AUTOBLOCKER_", None),
        "no_ter_antartique": True,
        "ok_all_xml": True,
        "ok_dynzon": False,
        "prt_level": 0,
        "raz_date": ("_AUTOBLOCKER_", None),
        "type_ocean": ("_AUTOBLOCKER_", None),
        "type_trac": ("_AUTOBLOCKER_", None),
        "use_filtre_fft": True,
        "version_ocean": "nemo",
    }
vert_L95 
vert_L95()
Source code in tests/test_def_file.py 
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@pytest.fixture
def vert_L95():
    return _load_file("vert.def_L95.r7417")

test_def_file_decoder

Unit tests of DefFileDecoder

Functions

decoder 
decoder()

Initialize classical decoder

Source code in tests/test_def_file_decoder.py 
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@pytest.fixture
def decoder():
    """Initialize classical decoder"""
    return DefFileDecoder()
decoder_with_positions 
decoder_with_positions()

Initialize decoder with value position parsing

Source code in tests/test_def_file_decoder.py 
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@pytest.fixture
def decoder_with_positions():
    """Initialize decoder with value position parsing"""
    return DefFileDecoder(include_positions=True)
test_array 
test_array(decoder)

Test decoding of arrays

Source code in tests/test_def_file_decoder.py 
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def test_array(decoder):
    """Test decoding of arrays"""
    assert decoder.decode("a = 1,2") == {"a": [1, 2]}
    assert decoder.decode("a = 1,2,3") == {"a": [1, 2, 3]}
    assert decoder.decode("a = a, 2, y") == {"a": ["a", 2, True]}
test_auto 
test_auto(decoder)

Test decoding of auto values

Source code in tests/test_def_file_decoder.py 
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def test_auto(decoder):
    """Test decoding of auto values"""
    assert decoder.decode("a=_AUTO_") == {"a": ("_AUTO_", None)}
    assert decoder.decode("a=_AUTO_:DEFAULT=3.14") == {"a": ("_AUTO_", 3.14)}
    assert decoder.decode("a=_AUTOBLOCKER_") == {"a": ("_AUTOBLOCKER_", None)}
    assert decoder.decode("a=_AUTOBLOCKER_:DEFAULT='text'") == {
        "a": ("_AUTOBLOCKER_", "'text'")
    }
test_float 
test_float(decoder)

Test decoding float numbers

Source code in tests/test_def_file_decoder.py 
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def test_float(decoder):
    """Test decoding float numbers"""
    assert decoder.decode("a=3.1415") == {"a": 3.1415}
    assert decoder.decode("a=3.14e2") == {"a": 314}
    assert decoder.decode("a=3.14e-2") == {"a": 0.0314}
    assert decoder.decode("a=-3.1415") == {"a": -3.1415}
    assert decoder.decode("a=-3.14e2") == {"a": -314}
    assert decoder.decode("a=-3.14e-2") == {"a": -0.0314}
test_include 
test_include(decoder)

Test decoding of INCLUDEDEF statements

Source code in tests/test_def_file_decoder.py 
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def test_include(decoder):
    """Test decoding of INCLUDEDEF statements"""
    assert decoder.decode("INCLUDEDEF=module1") == {"INCLUDEDEF": ["module1"]}
    assert decoder.decode("INCLUDEDEF=module1\nINCLUDEDEF=module2") == {
        "INCLUDEDEF": ["module1", "module2"]
    }
test_integer 
test_integer(decoder)

Test decoding integer numbers

Source code in tests/test_def_file_decoder.py 
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def test_integer(decoder):
    """Test decoding integer numbers"""
    assert decoder.decode("a=1") == {"a": 1}
    assert decoder.decode("a=-1") == {"a": -1}
    assert decoder.decode("a=-0") == {"a": 0}
    assert decoder.decode("a=+0") == {"a": 0}
    assert decoder.decode("a=6123") == {"a": 6123}
test_logical 
test_logical(decoder)

Test decoding logical values

Source code in tests/test_def_file_decoder.py 
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def test_logical(decoder):
    """Test decoding logical values"""
    assert decoder.decode("a = true\nb=y\nc=TRUE") == {"a": True, "b": True, "c": True}
    assert decoder.decode("a = false\nb=n\nc=FALSE") == {
        "a": False,
        "b": False,
        "c": False,
    }
test_positions 
test_positions(decoder_with_positions)

Test decoding of value positions

Source code in tests/test_def_file_decoder.py 
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def test_positions(decoder_with_positions):
    """Test decoding of value positions"""
    assert decoder_with_positions.decode("a=1\nb='text'\nc=_AUTO_:DEFAULT=3.14") == {
        "a": {"value": 1, "start_pos": 2, "end_pos": 3},
        "b": {"value": "'text'", "start_pos": 6, "end_pos": 12},
        "c": {"value": ("_AUTO_", 3.14), "start_pos": 15, "end_pos": 34},
    }
test_string 
test_string(decoder)

Test decoding strings (quoted and unqoted)

Source code in tests/test_def_file_decoder.py 
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def test_string(decoder):
    """Test decoding strings (quoted and unqoted)"""
    assert decoder.decode("a=text") == {"a": "text"}
    assert decoder.decode("a='text'") == {"a": "'text'"}
    assert decoder.decode('a="text"') == {"a": '"text"'}

test_def_file_encoder

Functions

encoder 
encoder()
Source code in tests/test_def_file_encoder.py 
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@pytest.fixture
def encoder():
    return DefFileEncoder()
encoder_bool_labels 
encoder_bool_labels()
Source code in tests/test_def_file_encoder.py 
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@pytest.fixture
def encoder_bool_labels():
    return DefFileEncoder(truthy_value="y", falsey_value="n")
test_bool 
test_bool(encoder)
Source code in tests/test_def_file_encoder.py 
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def test_bool(encoder):
    assert encoder.encode(True) == "true"
    assert encoder.encode(False) == "false"
test_bool_labels 
test_bool_labels(encoder_bool_labels)
Source code in tests/test_def_file_encoder.py 
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def test_bool_labels(encoder_bool_labels):
    # Test other labels for true/false values
    # These changes are local to this test, and will not affect other tests
    encoder_bool_labels._truthy_value = "y"
    encoder_bool_labels._falsey_value = "n"
    assert encoder_bool_labels.encode(True) == "y"
    assert encoder_bool_labels.encode(False) == "n"
test_dict 
test_dict(encoder)
Source code in tests/test_def_file_encoder.py 
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def test_dict(encoder):
    assert encoder.encode({"p": 1}) == "p = 1"
    assert encoder.encode({"p": 1, "q": 2}) == "p = 1\nq = 2"
    assert (
        encoder.encode({"INCLUDEDEF": ["m1", "m2"], "p": 1})
        == "INCLUDEDEF = m1\nINCLUDEDEF = m2\np = 1"
    )
    with pytest.raises(TypeError, match="cannot be of type: dict"):
        encoder.encode({"p": {"q": 2}})
test_float 
test_float(encoder)
Source code in tests/test_def_file_encoder.py 
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def test_float(encoder):
    assert encoder.encode(-1.0) == "-1.0"
    assert encoder.encode(+1.0) == "1.0"
    assert encoder.encode(5e4) == "50000.0"
    assert encoder.encode(3.14e2) == "314.0"
    assert encoder.encode(3.14e-2) == "0.0314"
test_int 
test_int(encoder)
Source code in tests/test_def_file_encoder.py 
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def test_int(encoder):
    assert encoder.encode(-1) == "-1"
    assert encoder.encode(+1) == "1"
    assert encoder.encode(int(5e4)) == "50000"
test_list 
test_list(encoder)
Source code in tests/test_def_file_encoder.py 
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def test_list(encoder):
    assert encoder.encode([1, 2]) == "1, 2"
    assert encoder.encode([1, 2, "a"]) == "1, 2, a"
    with pytest.raises(ValueError, match="at least two elements"):
        assert encoder.encode([])
    with pytest.raises(ValueError, match="at least two elements"):
        assert encoder.encode([1])
    with pytest.raises(TypeError, match="must be simple scalars"):
        assert encoder.encode([1, {}])
    with pytest.raises(TypeError, match="must be simple scalars"):
        assert encoder.encode([1, {"p": 2}])
    with pytest.raises(TypeError, match="must be simple scalars"):
        assert encoder.encode([1, ()])
    with pytest.raises(TypeError, match="must be simple scalars"):
        assert encoder.encode([1, (2, 3)])
    with pytest.raises(TypeError, match="must be simple scalars"):
        assert encoder.encode([1, []])
    with pytest.raises(TypeError, match="must be simple scalars"):
        assert encoder.encode([1, [2, 3]])
test_tuple 
test_tuple(encoder)
Source code in tests/test_def_file_encoder.py 
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def test_tuple(encoder):
    assert encoder.encode(("_AUTO_", None)) == "_AUTO_"
    assert encoder.encode(("_AUTOBLOCKER_", None)) == "_AUTOBLOCKER_"
    assert encoder.encode(("_AUTO_", True)) == "_AUTO_: DEFAULT=true"
    assert encoder.encode(("_AUTO_", 3)) == "_AUTO_: DEFAULT=3"
    assert encoder.encode(("_AUTO_", 3.14)) == "_AUTO_: DEFAULT=3.14"
    assert encoder.encode(("_AUTO_", "text")) == "_AUTO_: DEFAULT=text"
    assert encoder.encode(("_AUTO_", "'text'")) == "_AUTO_: DEFAULT='text'"
    assert encoder.encode(("_AUTO_", '"text"')) == '_AUTO_: DEFAULT="text"'
    with pytest.raises(ValueError, match="len=2"):
        assert encoder.encode(())
    with pytest.raises(ValueError, match="len=2"):
        assert encoder.encode(("_AUTO_",))
    with pytest.raises(ValueError, match="len=2"):
        assert encoder.encode(("_AUTO_", None, None))
    with pytest.raises(ValueError, match="First element"):
        assert encoder.encode(("AUTO", None))
    with pytest.raises(ValueError, match="First element"):
        assert encoder.encode((None, None))
    with pytest.raises(TypeError, match="Second element"):
        assert encoder.encode(("_AUTO_", ()))
    with pytest.raises(TypeError, match="Second element"):
        assert encoder.encode(("_AUTO_", (1, 2, 3)))
    with pytest.raises(TypeError, match="Second element"):
        assert encoder.encode(("_AUTO_", {}))
    with pytest.raises(TypeError, match="Second element"):
        assert encoder.encode(("_AUTO_", {"k1": 1, "k2": 2, "k3": 3}))
    with pytest.raises(TypeError, match="Second element"):
        assert encoder.encode(("_AUTO_", []))
    with pytest.raises(TypeError, match="Second element"):
        assert encoder.encode(("_AUTO_", [1, 2, 3]))

test_envmodules

Functions

test_on_spirit 
test_on_spirit()
Source code in tests/test_envmodules.py 
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@pytest.mark.skipif(
    not is_espri_spiritx(), reason="This test can be run only on ESPRI/SpiritX"
)
def test_on_spirit():
    modules = EnvModules()
    assert modules.list_loaded() == []
    assert "gcc/13.2.0" in modules.list_available()
    assert modules.purge()
    assert modules.load("gcc/13.2.0", "cdo/2.3.0")
    assert modules.list_loaded() == ["cdo/2.3.0", "gcc/13.2.0"]

test_mod_file

Functions

configs 
configs(mod_file)
Source code in tests/test_mod_file.py 
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@pytest.fixture
def configs(mod_file):
    return mod_file["configuration"]
grisli 
grisli(configs)
Source code in tests/test_mod_file.py 
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@pytest.fixture
def grisli(configs):
    return configs["GRISLI"]
ioipsl 
ioipsl(configs)
Source code in tests/test_mod_file.py 
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@pytest.fixture
def ioipsl(configs):
    return configs["IOIPSL_PLUS"]
ipslcm7 
ipslcm7(configs)
Source code in tests/test_mod_file.py 
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@pytest.fixture
def ipslcm7(configs):
    return configs["IPSLCM7.0"]
mod_file 
mod_file()
Source code in tests/test_mod_file.py 
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@pytest.fixture
def mod_file():
    root = Path(__file__).parent.resolve()
    with open(root / "examples" / "modipsl" / "mod.def.r7473") as f:
        return load(f)
nemo_v40 
nemo_v40(configs)
Source code in tests/test_mod_file.py 
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@pytest.fixture
def nemo_v40(configs):
    return configs["NEMO_v4.0"]
repos 
repos(mod_file)
Source code in tests/test_mod_file.py 
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@pytest.fixture
def repos(mod_file):
    return mod_file["repository"]
test_configuration 
test_configuration(configs)
Source code in tests/test_mod_file.py 
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def test_configuration(configs):
    assert len(configs) == 62
test_git_path_repository 
test_git_path_repository(repos)
Source code in tests/test_mod_file.py 
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def test_git_path_repository(repos):
    # Test local repo with a path
    assert repos[24] == {
        "type": "git",
        "clone_url": "/ccc/work/cont003/igcmg/igcmg/IGCM/LIC/ELMERICE/elmerfem",
    }
test_git_repository 
test_git_repository(repos)
Source code in tests/test_mod_file.py 
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def test_git_repository(repos):
    # Test classic git repo
    assert repos[7] == {
        "type": "git",
        "clone_url": "https://gitlab.in2p3.fr/ipsl/projets/nemogcm/nemo.git",
    }
test_grisli_configuration 
test_grisli_configuration(grisli)
Source code in tests/test_mod_file.py 
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def test_grisli_configuration(grisli):
    # GRISLI configuration is interesting to test, because it has
    # identical name of the second and the third components: GRISLI
    # This is the use case that forbids us from using dictionary to
    # store componets by their name ;(
    assert grisli == {
        "description": ["GRISLI stand-alone for Antarctica icesheets (prototype)"],
        "components": [
            {
                "name": "libIGCM",
                "variant": "trunk/libIGCM",
                "revision": "HEAD",
                "repository": 10,
                "modipsl_dir": ".",
            },
            {
                "name": "GRISLI",
                "variant": "branches/xios",
                "revision": "HEAD",
                "repository": 26,
                "modipsl_dir": "modeles",
            },
            {
                "name": "GRISLI",
                "variant": "CONFIG/GRISLI",
                "revision": "HEAD",
                "repository": 8,
                "modipsl_dir": "config",
            },
            {
                "name": "XIOS",
                "variant": "XIOS3_2902",
                "revision": "243e0b53",
                "repository": 12,
                "modipsl_dir": "modeles",
            },
        ],
    }
test_ioipsl_config 
test_ioipsl_config(ioipsl)
Source code in tests/test_mod_file.py 
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def test_ioipsl_config(ioipsl):
    # Test parsing of the configuration description
    assert ioipsl == {
        "description": [
            "IOIPSL contains source for library and for rebuild",
            "IOIPSL last tagged public version",
        ],
        "components": [
            {
                "name": "IOIPSL",
                "variant": "IOIPSL/tags/v2_2_5",
                "revision": "HEAD",
                "repository": 8,
                "modipsl_dir": "modeles",
            }
        ],
    }
test_ipslcm7_config 
test_ipslcm7_config(ipslcm7)
Source code in tests/test_mod_file.py 
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def test_ipslcm7_config(ipslcm7):
    # Test parsing of the configuration description
    assert ipslcm7 == {
        "description": [
            "IPSLCM7.0 1st coupled configuration in CM7 family",
            "With this configuration icosa grid or reg grid can be used (user choice)",
            "IPSLCM7 can be use in full coupled configuration or with forced subconfiguration",
            "Regular subconfiguration (without ocean) give same results than with IPSLCM6.2.4",
            "NEMO v4.2.2",
            "XIOS2 branches/XIOS2 07f8fdd9 (SVN : XIOS2/trunk revision 2626)",
            "IOIPSL tags v2_2_5",
            "DYNAMICO master 73d9b2d9",
            "ICOSA_LMDZ rev 4858",
            "LMDZ6 trunk revision 4938",
            "ORCHIDEE_2_2 default : branches/ORCHIDEE_2_2 revision 8572",
            "ORCHIDEE_4 optional  : trunk revision 8571",
            "INCA6 trunk revison  1151",
            "OASIS3-MCT 2.0_branch (rev 1818 Cerfacs server, rev 6331 IPSL server)",
            "CONFIG/IPSLCM7 rev 6881",
            "libIGCM trunk rev 1659",
        ],
        "components": [
            {
                "name": "DYNAMICO",
                "variant": "master",
                "revision": "73d9b2d9",
                "repository": 21,
                "modipsl_dir": "modeles",
            },
            {
                "name": "ICOSA_LMDZ",
                "variant": "ICOSA_LMDZ",
                "revision": "4897",
                "repository": 20,
                "modipsl_dir": "modeles",
            },
            {
                "name": "IOIPSL",
                "variant": "IOIPSL/tags/v2_2_5",
                "revision": "6644",
                "repository": 8,
                "modipsl_dir": "modeles",
            },
            {
                "name": "ORCHIDEE_2_2",
                "variant": "branches/ORCHIDEE_2_2/ORCHIDEE",
                "revision": "8572",
                "repository": 14,
                "modipsl_dir": "modeles",
            },
            {
                "name": "ORCHIDEE_4",
                "variant": "trunk/ORCHIDEE",
                "revision": "8571",
                "repository": 14,
                "modipsl_dir": "modeles",
            },
            {
                "name": "oasis3-mct",
                "variant": "CPL/oasis3-mct/branches/OASIS3-MCT_5.0_branch",
                "revision": "6331",
                "repository": 8,
                "modipsl_dir": ".",
            },
            {
                "name": "LMDZ",
                "variant": "LMDZ6/trunk",
                "revision": "4938",
                "repository": 20,
                "modipsl_dir": "modeles",
            },
            {
                "name": "IPSLCM7",
                "variant": "CONFIG/UNIFORM/v7/IPSLCM7",
                "revision": "6886",
                "repository": 8,
                "modipsl_dir": "config",
            },
            {
                "name": "ORCHIDEE_OL_2_2",
                "variant": "branches/ORCHIDEE_2_2/ORCHIDEE_OL",
                "revision": "8572",
                "repository": 14,
                "modipsl_dir": "config",
            },
            {
                "name": "ORCHIDEE_OL_4",
                "variant": "trunk/ORCHIDEE_OL",
                "revision": "8571",
                "repository": 14,
                "modipsl_dir": "config",
            },
            {
                "name": "libIGCM",
                "variant": "trunk/libIGCM",
                "revision": "1659",
                "repository": 10,
                "modipsl_dir": ".",
            },
            {
                "name": "NEMO",
                "variant": "4.2.2",
                "revision": "7f5d8137",
                "repository": 22,
                "modipsl_dir": "modeles",
            },
            {
                "name": "INCA",
                "variant": "INCA",
                "revision": "INCA6@1151",
                "repository": 9,
                "modipsl_dir": "modeles",
            },
            {
                "name": "XIOS",
                "variant": "XIOS2",
                "revision": "07f8fdd9",
                "repository": 12,
                "modipsl_dir": "modeles",
            },
        ],
    }
test_nemo_v40_confguration 
test_nemo_v40_confguration(nemo_v40)
Source code in tests/test_mod_file.py 
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def test_nemo_v40_confguration(nemo_v40):
    # NEMO_v4.0 is interesting to test, because it doesn't contain
    # the last optional column which usually contains duplicated
    # names of components (we don't parse it anyway).
    assert nemo_v40 == {
        "description": [
            "NEMOGCM v4.0.7, first version of NEMOv4 ( Initially NEMO_v6.5 )",
            "libIGCM trunk rev 1534",
            "XIOS branches/XIOS2 4b547204 (SVN : XIOS/trunk revision 1866)",
        ],
        "components": [
            {
                "name": "libIGCM",
                "variant": "trunk/libIGCM",
                "revision": "1581",
                "repository": 10,
                "modipsl_dir": ".",
            },
            {
                "name": "NEMO",
                "variant": "r4.0.7",
                "revision": "baad91e5",
                "repository": 7,
                "modipsl_dir": "modeles",
            },
            {
                "name": "NEMO_v6",
                "variant": "CONFIG/UNIFORM/v6/NEMO_v6.5",
                "revision": "6400",
                "repository": 8,
                "modipsl_dir": "config",
            },
            {
                "name": "XIOS",
                "variant": "XIOS2",
                "revision": "4b547204",
                "repository": 12,
                "modipsl_dir": "modeles",
            },
        ],
    }
test_repository 
test_repository(repos)
Source code in tests/test_mod_file.py 
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def test_repository(repos):
    assert len(repos) == 19
test_svn_repository 
test_svn_repository(repos)
Source code in tests/test_mod_file.py 
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def test_svn_repository(repos):
    # Test classic svn repo with --username flag
    assert repos[10] == {
        "type": "svn",
        "clone_url": "--username icmc_users https://forge.ipsl.fr/libigcm/svn",
    }
test_svn_ssh_repository 
test_svn_ssh_repository(repos)
Source code in tests/test_mod_file.py 
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def test_svn_ssh_repository(repos):
    # Test repo over svn+ssh protocol
    assert repos[26] == {
        "type": "svn",
        "clone_url": "svn+ssh://<login>@forge.ipsl.fr/ipsl/forge/projets/grisli/svn/",
    }